Insertion junction: CLIP2.063746_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063746
Chromosome:chromosome 16
Location:6073314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677700 NUP62 Nucleoporin 62; (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCAACCCGCCTGCTTGCGCCTTGCCCCAACCCAGCAGCTCCTAAGC
Internal bar code:AGCTGCATTTGCGTAGCCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACCTCTCGTTCGGCCAC
Suggested primer 2:GTTTCAGGGGATGGGGTCTG