Insertion junction: CLIP2.063748_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063748
Chromosome:chromosome 16
Location:3742324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683437 (1 of 1) K16278 - E3 ubiquitin-protein ligase HOS1 [EC:6.3.2.19] (HOS1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGCTGAGGTCTAGGCAAAGCCAATGCCAAATATCCTCGAGGGATAG
Internal bar code:ATATATTTTCCACCTTGTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3995
LEAP-Seq percent confirming:96.25
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGTGGTGTGATGGTGG
Suggested primer 2:GAGGATGGAGGTGAGGAGGT