Insertion junction: CLIP2.063752_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063752
Chromosome:chromosome 2
Location:4481886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106550 (1 of 1) K12839 - survival of motor neuron-related-splicing factor 30 (SMNDC1, SPF30) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACGAGCAGACAGTGCGGGGTTGTGCTAATGCTGACGTAGTGCAACTT
Internal bar code:GAGAGACAGCGAATCAGGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2951
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAACCTGCGTGGCATATG
Suggested primer 2:AGCAAGATCCGCTTCCAACA