Insertion junction: CLIP2.063775_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063775
Chromosome:chromosome 7
Location:5225779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349137 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTGAAGTTTCATCCAGCCTGTGTTATGGGTGCGGTATATGTACTATT
Internal bar code:AGTCTGCGTTGGTTAGGCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCCAAAACCTGCTTCG
Suggested primer 2:CAGACGAAGACCAAGACGCT