Insertion junction: CLIP2.063779_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063779
Chromosome:chromosome 6
Location:487232
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g252800 LPS1 (1 of 1) PTHR21493//PTHR21493:SF141 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAATATAATACAAGTGTGCAATATTAATTCAGGCAGGCTCTGAATCCG
Internal bar code:GTTTCTGAGATTCAGACAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:17.8082
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACTGAAGCCCCACAAGC
Suggested primer 2:GCACTCCTTCAGCCCGTATT