Insertion junction: CLIP2.063782_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063782
Chromosome:chromosome 3
Location:4233621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173850 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAATAGTTTCACCAGGTGTGTGGGGTGTTGCCGTGCAAGGTCGGCGT
Internal bar code:TTCGCCAGATCCGTGAGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1463
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGAATGTCGTGGTGGAG
Suggested primer 2:CATCCGCGTCGATACCTTCA