Insertion junction: CLIP2.063794_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063794
Chromosome:chromosome 3
Location:2367557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158400 FAP218 Flagellar Associated Protein 218; (1 of 1) IPR023160 - Ribonuclease HII, helix-loop-helix cap domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCACTTTGGGGGACAATGGCCCTCCTCCTCTTCTTTTCAACCTATTT
Internal bar code:GTCATGTGCAGTTGTTCACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1984
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGCAGAATCACATCG
Suggested primer 2:CTATCGCCTAGGCCACTGTG