Insertion junction: CLIP2.063796_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063796
Chromosome:chromosome 1
Location:6709062
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g047950 IFT27,Rabl4,FAP156 (1 of 1) K07934 - intraflagellar transport protein 27 homolog (IFT27, RAYL, RABL4); Intraflagellar transport protein 27 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGGTGGCTGCAACGCGTGGCTGGTGCAAGGGGTGCGCCTGGCTGGTG
Internal bar code:GACTCTATCTACTTGGTGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCGGTAGAAGGTGGTG
Suggested primer 2:ATCGATATCACCGCAACGCT