Insertion junction: CLIP2.063810_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063810
Chromosome:chromosome 6
Location:4321520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278265 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGTCTCATTCCCTTCTTCCATGCAAACTACCTATGATAAGTGCGTGT
Internal bar code:TCTGACATTGGAGGCAATGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4995
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCAGGGTAGGGATCCT
Suggested primer 2:TACTCCCACTCCTCCTGACG