Insertion junction: CLIP2.063819_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063819
Chromosome:chromosome 16
Location:7396975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680454 (1 of 8) PF13417 - Glutathione S-transferase, N-terminal domain (GST_N_3) 3'UTR
Cre16.g680566 (1 of 2) K17506 - protein phosphatase 1L [EC:3.1.3.16] (PPM1L, PP2CE) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCTCGATAGCGATAGCGCGTGATTGGGAGTGTGTGTGCTGCAGCGTG
Internal bar code:TGGCAACAGTGTCATGGGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3289
LEAP-Seq percent confirming:98.4127
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:126

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGAATCTCCACGCGTCA
Suggested primer 2:CACGGGAAGTTCGGAGTGAA