Insertion junction: CLIP2.063822_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063822
Chromosome:chromosome 17
Location:2026731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710850 TPT4,TPT29 UDP-xylose transporter; (1 of 4) K15285 - solute carrier family 35, member E3 (SLC35E3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGCAGGCTTTTTGAGAGGACTTGTTCGGGCGTAAAAACTGCACGGA
Internal bar code:GATACATAATATGTTCATGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2000
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGTTGCATTTTCGTGCC
Suggested primer 2:GCCTACCAGTACCATACCGC