Insertion junction: CLIP2.063825_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063825
Chromosome:chromosome 8
Location:3808910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTTAGTAAATGCGCGAGGACCCTTGAGAAGGCCGGATCCTATATCCA
Internal bar code:TCGGGACCTCCGCGTCGCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4203
LEAP-Seq percent confirming:54.0984
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTTACAGTTACAGCCCG
Suggested primer 2:TGTTGCCGTGCTGTACTGAT