Insertion junction: CLIP2.063825_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063825
Chromosome:chromosome 8
Location:3808935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCCAGTCTCAAGTCAAGCACACTGCTGCCGCTTCCTGGCATCTGGAA
Internal bar code:GCCCACGGTTGGTGCACTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5184
LEAP-Seq percent confirming:2.32558
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCCGTGCTGTACTGAT
Suggested primer 2:TGCCTTACAGTTACAGCCCG