Insertion junction: CLIP2.063836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063836
Chromosome:chromosome 11
Location:410863
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801231 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTACTATTAGATTGCTTTGACCTGCTTGTGTCAGCCGATATTGTCTT
Internal bar code:TTGGTGGTGTTGTACTATCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2186
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAATCGGTGCGTATGC
Suggested primer 2:GAGTAGGGCTTGCTCGCTAG