Insertion junction: CLIP2.063837_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063837
Chromosome:chromosome 12
Location:2730849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504500 HTA15,HTA16 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAATGGCTGGTCGCGGCAAGGGCAAGACCTCTGGCAAGAAGGCCGTGA
Internal bar code:ATAGTCAAGGCGCGTAATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2372
LEAP-Seq percent confirming:60.8108
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATTTGCACACAGGAAT
Suggested primer 2:CGTTTAGCCCGAGGTGAACT