Insertion junction: CLIP2.063843_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063843
Chromosome:chromosome 8
Location:3668420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380000 UMM7 UbiE/COQ5 methyltransferase family protein; (1 of 1) PTHR10108//PTHR10108:SF894//PTHR23150//PTHR23150:SF24 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED // SULFATASE MODIFYING FACTOR 1, 2 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATGAACGGTGCCAGCAGGCGACGCGAATGCCAAGGCAGGGCTCGATT
Internal bar code:GCTTAGAGGGGAGCAATGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1890
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCGCTTCCCCACTTGAT
Suggested primer 2:CGTGGACATCAGCAAGACCT