Insertion junction: CLIP2.063845_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063845
Chromosome:chromosome 3
Location:8809267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206705 (1 of 3) PF10250 - GDP-fucose protein O-fucosyltransferase (O-FucT) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCTGCTGGTACAACCGGTTCTGTGGTGCAGGTGCATGACATCGACCT
Internal bar code:TCGCCATATTATCGTTATGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1623
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCCGTTCTGCATTGTAT
Suggested primer 2:CTTGCTGTTGCTGCAGTCAG