Insertion junction: CLIP2.063848_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063848
Chromosome:chromosome 6
Location:5152811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283300 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACCCCTACCCCTGCCCCACAGTGTTCCCCACCCCATGCAACATCCC
Internal bar code:CCGCTGGTGAATTGTGTGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2750
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGAAGCTCATTTCGCGG
Suggested primer 2:CAAAGTTGTGGCGTGGTGAG