Insertion junction: CLIP2.063852_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063852
Chromosome:chromosome 16
Location:5021362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686100 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACAGGAAGCGGTGAATTGTATTGCGGAGGGGGTTGTTGCCATGCCTC
Internal bar code:CGCCGTAGCATTCTGGATAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1531
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCAGCTCTGCTATAGC
Suggested primer 2:GAGGAGTGTGGTGTCGTCAG