Insertion junction: CLIP2.063860_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063860
Chromosome:chromosome 6
Location:2865813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272350 5'UTR
Cre06.g272400 (1 of 1) PTHR11247:SF1 - DOLICHYLDIPHOSPHATASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCATTTAGGACAGAGCGCAAGGCTTGCAGTACTTCCATCGTGTCAAG
Internal bar code:CAATGCTAAATCGGGTAGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1900
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATTTGAGTCGATTGCGC
Suggested primer 2:CCGTCGCCGAATCTGACATA