Insertion junction: CLIP2.063861_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063861
Chromosome:chromosome 16
Location:5267549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684100 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGACTTAGTCAAGACGCAGGGCTGTAGCATTAGCATTAGCAGGCTAG
Internal bar code:TCTGCTGCAACCCGTTAAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1210
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCCTAAGAGCAGAGAGG
Suggested primer 2:AGTCCCACGTGTTCACGTAC