Insertion junction: CLIP2.063881_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063881
Chromosome:chromosome 1
Location:8063500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g062172 HBV1 (1 of 27) K11252 - histone H2B (H2B); Histone H2B variant 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAAAGAGTTTAATAACAAACAACGCGAAGAGAGCTTTTATTAGGGGC
Internal bar code:GAATACTGCTTGTTACTTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1854
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAGTTTGTGTTTCGCC
Suggested primer 2:TCGTTGGCCATCTTGTCGAA