Insertion junction: CLIP2.063883_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063883
Chromosome:chromosome 11
Location:1967296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467774 (1 of 1) IPR000104//IPR003409 - Antifreeze protein, type I // MORN motif 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCTTGAAGCGAAGAGGCGAAGCACAGAGGCGACGGACTAGTAACACG
Internal bar code:TTTTGGAAGTAAGATACGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3809
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTTCCATCTACGCCTCC
Suggested primer 2:CGTCAATGGCAGTAGCAACG