Insertion junction: CLIP2.063886_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063886
Chromosome:chromosome 3
Location:3677341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g168650 (1 of 1) PF08621 - RPAP1-like, N-terminal (RPAP1_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTGTGGAGGCCCACGTTCGGAGTGGGCTGTGTTATTGTGGCGTCACG
Internal bar code:TTGTTTACCGTAAAATAGACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCTGCAACAACAAGTA
Suggested primer 2:ACTGTACCGACGAGTTGCTG