Insertion junction: CLIP2.063887_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063887
Chromosome:chromosome 16
Location:4775622
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g687800 PTK22 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED; Protein tyrosine kinase gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCGGAGCCCACCGGTTCGCCCACACTCACACTCTGGACAGCTCGTTT
Internal bar code:TGCCTTATCTGATACTGGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:974
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAAACAGCGCTTGAGCC
Suggested primer 2:CAGCACACTTGTCAACAGCC