Insertion junction: CLIP2.063893_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063893
Chromosome:chromosome 7
Location:1512044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324200 BTA1 (1 of 1) K13621 - betaine lipid synthase (BTA1); Diacylglyceryl-N,N%252CN-trimethylhomoserine synthesis protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCTAGCCACCCGCAGGCTATCGCCCCAGGCCTGCAGTATTGCATCGC
Internal bar code:TGTGTCTTTGAGCTGGTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2651
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCCGTGTAGCGTTACAA
Suggested primer 2:TGTGCACACCAGACGAGTAC