Insertion junction: CLIP2.063895_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063895
Chromosome:chromosome 4
Location:1229384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAACACCCAGGCCGCAGCCATGGCCTCACCGCGGACTGCTCGCCGCG
Internal bar code:CGTGACATCATAAGCATGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2573
LEAP-Seq percent confirming:74.0741
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTCGTGCGGGATGGATT
Suggested primer 2:GAGGTGCGACTACGGAGATG