Insertion junction: CLIP2.063895_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063895
Chromosome:chromosome 4
Location:1229391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGCAATGTGGCAGCTAGCGCTTGAAGCTGTGGGGTGCCAACGGTTA
Internal bar code:AGGTTCAGCGAGGCAATTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2809
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTGCGACTACGGAGATG
Suggested primer 2:AAGTTCGTGCGGGATGGATT