Insertion junction: CLIP2.063902_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063902
Chromosome:chromosome 2
Location:7306685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391467 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGGTTTAGGCCTGCAAGCAAGCGGCCGGGACAGCATTATGGAGGTTG
Internal bar code:GTGGTGATGCGGATCGAGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2463
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCACCACGACTACTTC
Suggested primer 2:ATGATGGTGGTGGTGAGCAG