Insertion junction: CLIP2.063909_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063909
Chromosome:chromosome 17
Location:2104768
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g802047 (1 of 14) IPR002156//IPR012337 - Ribonuclease H domain // Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGAGGCTTTGCGGCGGCCATCGCCCGCCTGCTCCTCCGATACAAAC
Internal bar code:TCGGCCGGGAAAGCTTGAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3594
LEAP-Seq percent confirming:6.84932
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGGATCTGGCCGAGAA
Suggested primer 2:GGTGGAATGGGAAGACCTGG