Insertion junction: CLIP2.063916_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063916
Chromosome:chromosome 16
Location:3268828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666200 CSK4 (1 of 2) PTHR11909//PTHR11909:SF146 - CASEIN KINASE-RELATED // CASEIN KINASE-LIKE PROTEIN; MUT9 related kinase, serine/threonine protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCTCTCCCACTTGGCTCACACCCACCAATACACTCCTCTACATGAAA
Internal bar code:TCGTGTTAAGCATAGTTCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:73.913
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTTCCAGTATCCGTCGG
Suggested primer 2:GACATTCTTGCCCCAAAGCG