Insertion junction: CLIP2.063918_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063918
Chromosome:chromosome 12
Location:6360154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537100 TSV,TSV2 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF5 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // VALYL-TRNA SYNTHETASE, ISOFORM A 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATCCCACTGATTGTGGGGCCCTGATTAAGACGAAGAGCGGCGGCGCT
Internal bar code:AGTCACTCGAGTGTTAGTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCAAAATGCGAGGGAGT
Suggested primer 2:GGATCCACTTCGTTTGCAGC