Insertion junction: CLIP2.063918_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063918
Chromosome:chromosome 12
Location:6360156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537100 TSV,TSV2 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF5 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // VALYL-TRNA SYNTHETASE, ISOFORM A 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTTAAACGGGCGTACTTGGTAGCCCGATGAAAAAGAGCGAGTTGTGT
Internal bar code:AGTCACTCGAGTGTTAGTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCCACTTCGTTTGCAGC
Suggested primer 2:ACGTCAAAATGCGAGGGAGT