Insertion junction: CLIP2.063920_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063920
Chromosome:chromosome 13
Location:56921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562100 3'UTR
Cre13.g562150 (1 of 1) PTHR23305:SF12 - GTP-BINDING PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCATGTACAGCGCCTTAGTCGGTTCGCACCCGATTTACACTGGCACA
Internal bar code:TTAGCCAGTTTCGTGTTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCAAGGAGTACGTTGTG
Suggested primer 2:TTGATTGCGTGGTGTTGCAG