Insertion junction: CLIP2.063928_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063928
Chromosome:chromosome 8
Location:4232817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384150 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTACTCCCGGCAACATATGCATCAATATCCAATCTGCCCACGTGGGT
Internal bar code:AATTACACCCCGGGATTAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:510
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTTGACTCCCATCGCGTT
Suggested primer 2:CCTCCTCATGTCCTCCTCCA