Insertion junction: CLIP2.063939_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063939
Chromosome:chromosome 8
Location:1392211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364200 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGACCCCGGCTATGTCCGGGAGATGAGGTAGACGCTTGCGGCCTCAG
Internal bar code:CTTTTATAATTTATACTGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3121
LEAP-Seq percent confirming:31.6832
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:69
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGACATTCTGGGAAGGCT
Suggested primer 2:GTTCAGTCCAATTCGGGGGT