Insertion junction: CLIP2.063948_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063948
Chromosome:chromosome 16
Location:5254725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684150 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATGCTGAGTCGCCCGGTATAAACATCAGTTAGCTATTACTGTTTGCA
Internal bar code:GTGACAAGTGAAATTCGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1526
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGATGTTGCATTCTGGGT
Suggested primer 2:CTGTTCGGGGTATCGTAGCC