Insertion junction: CLIP2.063952_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063952
Chromosome:chromosome 4
Location:3133198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225950 (1 of 11) PF00439 - Bromodomain (Bromodomain) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCAAAAAGCAGGAATGGCGACGGGTGTCTCACCAGGGTGTTCAGGGG
Internal bar code:TAGTGGCCCTGGGGGGGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1996
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACGCTTTAGCCGTTTAG
Suggested primer 2:CCCGCCCACCTTCAACTTAA