Insertion junction: CLIP2.063959_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063959
Chromosome:chromosome 1
Location:87562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000550 Putative nucleotide-diphospho-sugar transferase; (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGCAAAGCATGTGCGCGGTTACTTGGGTGGTAGCGGGGCTGTGTGGC
Internal bar code:ATAGGGGCAGCGTCAGTAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1289
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGTCTCTTGCTGTGTGT
Suggested primer 2:GACCTGTTACGGTCCCTGTG