Insertion junction: CLIP2.063960_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063960
Chromosome:chromosome 3
Location:6017558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189700 (1 of 2) K07735 - putative transcriptional regulator (algH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAAGCCCTGGGGAAAGCTCACGTCTCGAGGCTGGCAGTGGCTACGGT
Internal bar code:GGGCTTTATTATGCGACATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3339
LEAP-Seq percent confirming:93.0233
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAAACTCCGTCAACGAT
Suggested primer 2:CTTCTGTGTTGTGGCTGCAC