Insertion junction: CLIP2.063963_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063963
Chromosome:chromosome 17
Location:2163287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712200 (1 of 1) K11850 - ubiquitin carboxyl-terminal hydrolase 26/29/37 [EC:3.4.19.12] (USP26_29_37) 3'UTR
Cre17.g712250 (1 of 4) 2.7.11.13 - Protein kinase C / PKC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTCACATTATGCTCCGCAATGACAGACGTGAACCGCTGCGGCTGCCG
Internal bar code:GTCGGTTGCGTTTTTTTTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3247
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGACTGGGAGCCTTCTTG
Suggested primer 2:CCCAGGGGCCCACATTTATT