Insertion junction: CLIP2.063964_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063964
Chromosome:chromosome 6
Location:5414786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285600 MID,RWP5 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR
Cre06.g285650 ORC6 (1 of 1) PF05460 - Origin recognition complex subunit 6 (ORC6) (ORC6); Origin recognition complex subunit 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAAAGCCTATGGTACCGCATCATTTCCGTGCGGGGGACCGCTTGACC
Internal bar code:TCTTATCGCTGAGGTTTTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3643
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTTATGAGGGTGTTGGGCGA
Suggested primer 2:GTTGTTTGGTTCGTCCGTGG