Insertion junction: CLIP2.063969_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063969
Chromosome:chromosome 6
Location:3820781
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g278176 (1 of 1) PTHR22847//PTHR22847:SF500 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGAGTGGGAGAGGGAGAGCCGTGGTCCGCGGCGTCAGCGTGTGGAGG
Internal bar code:CTTGTCTAAAGGATCATACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCACTTCCGACACTCTCC
Suggested primer 2:GGTATGAAGGGGTGTTGGCA