Insertion junction: CLIP2.063981_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063981
Chromosome:chromosome 14
Location:911218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613350 (1 of 1) K14016 - ubiquitin fusion degradation protein 1 (UFD1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACGTCCGGCATCAGCTGCCCCGCCGCTGGACACACGAACATGCAGAG
Internal bar code:TTTGATCAGGGATATGTCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGCCTCACTAATGCGC
Suggested primer 2:AGCGAGCGATATCCCCAAAG