Insertion junction: CLIP2.063986_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063986
Chromosome:chromosome 7
Location:5630969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352350 FHL7,FTSHI6,FHL3,FTSHi6 (1 of 6) K03798 - cell division protease FtsH [EC:3.4.24.-] (ftsH, hflB); Chloroplast-import FtsH-like ATPase 5'UTR
Cre07.g352400 IPP5 Inositol polyphosphate related phosphatase; (1 of 2) 3.1.3.56 - Inositol-polyphosphate 5-phosphatase / Type I inositol-polyphosphate phosphatase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGGGCTCCAAGCGCCTATGGACCAAAGTGGTCTTTGCATGAAGGAGG
Internal bar code:CGAATTCGATTTACACAAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:88.6364
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCTGCGCTCCTTACTAC
Suggested primer 2:AAGCATTGTTTCCCGCGTTC