Insertion junction: CLIP2.063997_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063997
Chromosome:chromosome 17
Location:6777073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746697 FAP249 Flagellar Associated Protein 249; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCCGCTTAGATCCATTTTGCACCTTGAACATCCCTTGAAGCATTTAC
Internal bar code:GTGGTGCAGGTTCGTGTACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1513
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCAGTCGCAGTGCAAGAA
Suggested primer 2:CTCATGCATGGTGGGGAGTT