Insertion junction: CLIP2.063999_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063999
Chromosome:chromosome 11
Location:1130357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGCCATCAACATGTCCGATGCCACAATCTGCAGCTCCAAACGCCGC
Internal bar code:CTAACACCCACATGTCGACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:987
LEAP-Seq percent confirming:6.0241
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:78
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGCGCCATCGTACATGT
Suggested primer 2:TCGCTGTAACGAACACACGA