Insertion junction: CLIP2.063999_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063999
Chromosome:chromosome 17
Location:1436722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706400 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCGTGAAGCTTGGTCCTGCTGGTCACGGTCAGAGACTTGCCTGTCGA
Internal bar code:CGGGTTTGATCGTATTGTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4082
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGTCAAAACACCCACT
Suggested primer 2:GGCGGCCCCAAATACTACTT