Insertion junction: CLIP2.064005_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064005
Chromosome:chromosome 16
Location:5312112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683850 GDPD1,GDP1 Glycerophosphoryl diester phosphodiesterase family protein; (1 of 5) PTHR23344//PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTTGCGTGCGTGGGCGGCATTGAGGGCTGTTTCCAAGCTCCCGTCCT
Internal bar code:ATTAGTGATTTGGGCAGGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1662
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCACCGCATCTTTACT
Suggested primer 2:GCATGCCATGACGTCAGAAC