Insertion junction: CLIP2.064006_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064006
Chromosome:chromosome 4
Location:3138670
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g225950 (1 of 11) PF00439 - Bromodomain (Bromodomain) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGTGAGATGGGCGTCCTGACTGGGTTTACCGTACAGCATCGCGGAACT
Internal bar code:CGGTTCTCAGTATGTTAGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1509
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGTGTCGCAGTAGGGAG
Suggested primer 2:GTAGCAGTAACGCATTGCCG